Barsi JC*, Tu Q*, Calestani C, Davidson EH. Genome-wide assessment of differential effector gene use in embryogenesis. Development. 2015; 142(22): 3892–3901. *contributed equally

Barsi JC*, Tu Q*, Davidson EH. General approach for in vivo recovery of cell type-specific effector gene sets. Genome Res. 2014; 24(5): 860–868. *contributed equally

Tu Q, Cameron RA, Davidson EH. Quantitative developmental transcriptomes of the sea urchin Strongylocentrotus purpuratus. Dev Biol. 2014; 385(2):160-167.

Tu Q, Cameron RA, Worley KC, Gibbs RA, Davidson EH. Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis. Genome Res. 2012; 22(10): 2079–2087.

Oliveri P*, Tu Q*, Davidson EH. Global regulatory logic for specification of an embryonic cell lineage. Proc Natl Acad Sci U S A. 2008; 105(16):5955-62. * contributed equally.

Tu Q, Brown CT, Davidson EH, Oliveri P. Sea urchin Forkhead gene family: Phylogeny and embryonic expression. Dev Biol. 2006; 300(1):49-62.

Howard-Ashby M, Materna SC, Brown CT, Tu Q, Oliveri P, Cameron RA, Davidson EH. High regulatory gene use in sea urchin embryogenesis: Implications for bilaterian development and evolution. Dev Biol. 2006; 300(1):27-34.

Samanta MP, Tongprasit W, Istrail S, Cameron RA, Tu Q, Davidson EH, Stolc V. The transcriptome of the sea urchin embryo. Science. 2006; 314(5801):960-2.

Sea Urchin Genome Sequencing Consortium. The Genome of the Sea Urchin Strongylocentrotus purpuratus. Science. 2006; 314(5801):941-52.


Tu Q, Tang H, Ding D. MedBlast: searching articles related to a biological sequence. Bioinformatics. 2004; 20(1):75-7.

Tu Q, Ding D. Detecting pathogenicity islands and anomalous gene clusters by iterative discriminant analysis. FEMS Microbiol Lett. 2003; 221(2):269-75.

Tu Q, Yu L, Zhang P, Zhang M, Zhang H, Jiang J, Chen C, Zhao S. Cloning, characterization and mapping of the human ATP5E gene, identification of pseudogene ATP5EP1, and definition of the ATP5E motif. Biochem J. 2000; 347(Pt 1):17-21.

Zheng L, Yu L, Tu Q, Zhang M, He H, Chen W, Gao J, Yu J, Wu Q, Zhao S. Cloning and mapping of human PKIB and PKIG, and comparison of tissue expression patterns of three members of the protein kinase inhibitor family, including PKIA. Biochem J. 2000; 349(Pt 2):403-7.

Lang T, Yu L, Tu Q, Jiang J, Chen Z, Xin Y, Liu G, Zhao S. Molecular cloning, genomic organization, and mapping of PRKAG2, a heart abundant gamma2 subunit of 5'-AMP- activated protein kinase, to human chromosome 7q36. Genomics. 2000; 70(2):258-63.

屠强. 植物分类学工具软件 (PTT) 的设计. 安徽师大学报 (自然科学版). 1997; 20(2):189-93.