WormBase ID: WBGene00003846 WormBase description: Is an ortholog of human OSR1 (odd-skipped related transcription factor 1) and OSR2 (odd-skipped related transciption factor 2). Is predicted to have RNA polymerase II regulatory region sequence-specific DNA binding activity. Is expressed in intestine. |
Reporter verification: Verified by PCR and sequencing |
Strain name: SYS420 Cross: OP405 x JIM113 Strain genotype: ujIs113 (pie-1p::mCherry::H2B; nhr-2p::mCherry::his-24::let858 3'UTR; unc-119(+)) II; wgIs405 (odd-2::TY1::EGFP::3xFLAG + unc-119(+)) |
Expression pattern: Intestine-specific, Transient-expression |
Lineage expression pattern 350 stage |
600 stage |
3D expression pattern 4-cells 8-cells 15-cells 28-cells ~50-cells ~100-cells ~200-cells ~350-cells ~500-cells ~600-cells 600-cells bean-stage |
Inferred TF relationships Based on expression similarity (strong, medium, weak): MML-1, ZFH-2, PQM-1, ELT-2, NHR-232, DMD-4, ELT-7, END-1, CEH-51, DVE-1, NHR-102, PHA-4, LAG-1 Based on ChIP-seq (directly from ModERN database, targets from L1 stage ChIP-seq data are underlined) |
Based on reannotated ChIP-seq (peaks are assigned to a target if it is located within 2 kb relative to the transcription start site; targets from L1 stage ChIP-seq data are underlined) Targeting: ETS-5, HLH-1, SVH-5 Targeted by: PHA-4 |