WormBase ID: WBGene00022837 WormBase description: Is an ortholog of human GSC (goosecoid homeobox). Is predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II regulatory region sequence-specific DNA binding activity. Is expressed in pharynx and spermatheca. Human ortholog(s) of this gene are implicated in several diseases, including WAGR syndrome; diabetes mellitus (multiple); and eye disease (multiple). |
Strain name: SYS634 KI background: JIM113 Strain genotype: ujIs113 (pie-1p::mCherry::H2B; nhr-2p::mCherry::his-24::let858 3'UTR; unc-119(+)) II; ceh-45 (devKi191 [ceh-45::mNeonGreen]) I |
Expression pattern: Lineage-specific, Pharynx-specific |
Lineage expression pattern 350 stage |
600 stage |
3D expression pattern 4-cells 8-cells 15-cells 28-cells ~50-cells ~100-cells ~200-cells ~350-cells ~500-cells ~600-cells 600-cells bean-stage |
Inferred TF relationships Based on expression similarity (strong, medium, weak): CEH-2, AST-1, DMD-5, PAX-1, Y48G1C.6, EYG-1, SEM-2, CEH-34, CEH-16, PHA-4, LIM-7, CEH-27, MLS-2, DVE-1, M03D4.4, SPTF-1, Y75B8A.6, CES-2, SOX-2 Based on ChIP-seq (directly from ModERN database, targets from L1 stage ChIP-seq data are underlined) Targeting: no-data Targeted by: CEH-34, CEH-36, LSY-2, NFYA-1, REF-2, ZIP-8, ELT-3 |
Based on reannotated ChIP-seq (peaks are assigned to a target if it is located within 2 kb relative to the transcription start site; targets from L1 stage ChIP-seq data are underlined) Targeting: no-data |