C16A3.4

WormBase ID: WBGene00015809

WormBase description: Is an ortholog of human ZNF622 (zinc finger protein 622). Is predicted to have nucleic acid binding activity and zinc ion binding activity.

Reporter verification: Verified by PCR and sequencing
Primers used to verify fosmid reporter: 5'-AGTGGATGGGAAACTGACGATG-3'

Strain name: SYS492

Cross: OP345 x JIM113

Strain genotype: ujIs113 (pie-1p::mCherry::H2B; nhr-2p::mCherry::his-24::let858 3'UTR; unc-119(+)) II; wgIs345 (C16A3.4::TY1::EGFP::3xFLAG + unc-119(+))

Expression pattern: Skin-specific

Lineage expression pattern

350 stage

600 stage

3D expression pattern

4-cells

8-cells

15-cells

28-cells

~50-cells

~100-cells

~200-cells

~350-cells

~500-cells

~600-cells

600-cells

bean-stage

Inferred TF relationships

Based on expression similarity (strong, medium, weak): NHR-35, NHR-12, NHR-102, GMEB-1, NHR-23, HAM-2, Y56A3A.28, LIN-26, LAG-1


Based on ChIP-seq (directly from ModERN database, targets from L1 stage ChIP-seq data are underlined)

Targeting: NHR-35, NHR-102, GMEB-1, LAG-1, ALY-1, ATF-7, ATFS-1, ATHP-1, BLMP-1, CAMT-1, CEBP-1, CEH-20, CEH-38, CEH-39, CRH-2, DAF-12, DAF-19, DAF-3, DMD-5, EFL-1, EGL-44, EGRH-1, EOR-1, ETS-4, ETS-5, FOS-1, HLH-11, HLH-30, K09A11.1, LIM-7, LIN-1, LIN-13, LIN-15B, LIN-39, LSY-2, MDL-1, MEF-2, MEP-1, MML-1, NFI-1, NFYA-1, NHR-10, NHR-25, NHR-49, NHR-85, PHA-4, RCOR-1, SDZ-38, SEM-4, SKN-1, SMA-2, SWSN-7, T07F8.4, UNC-62, Y55F3AM.14, ZTF-30, ZTF-6

Targeted by: NA

Based on reannotated ChIP-seq (peaks are assigned to a target if it is located within 2 kb relative to the transcription start site; targets from L1 stage ChIP-seq data are underlined)

Targeting: NHR-35, GMEB-1, LAG-1, ALY-1, ATF-7, ATFS-1, ATHP-1, CAMT-1, CEBP-1, CEH-20, CEH-39, CEH-5, CRH-2, DAF-19, DMD-5, DPL-1, EFL-1, EGL-44, EOR-1, ETS-4, ETS-5, HLH-30, K10B3.5, LIN-13, LIN-15B, LSY-2, MDL-1, MEF-2, MEP-1, MML-1, NFI-1, NFYA-1, NFYC-1, NHR-10, NHR-25, NHR-49, NHR-85, RCOR-1, SEM-4, SKN-1, SMA-2, SWSN-7, T07F8.4, UNC-62, ZTF-30

Targeted by: NA