CEH-83

WormBase ID: WBGene00018446

WormBase description: Is an ortholog of human HINFP (histone H4 transcription factor). Is predicted to have DNA binding activity. Is expressed in hypodermis; intestine; and vulva.

Reporter verification: Verified by PCR and sequencing
Primers used to verify fosmid reporter: 5'-CAGAGTGATGGCTGAAAGGA-3'

Strain name: SYS396

Cross: OP727 x JIM113

Strain genotype: ujIs113 (pie-1p::mCherry::H2B; nhr-2p::mCherry::his-24::let858 3'UTR; unc-119(+)) II; wgIs727 (ceh-83::TY1::EGFP::3xFLAG + unc-119(+))

Expression pattern: Transient-expression

Lineage expression pattern

350 stage

600 stage

3D expression pattern

4-cells

8-cells

15-cells

28-cells

~50-cells

~100-cells

~200-cells

~350-cells

~500-cells

~600-cells

600-cells

bean-stage

Inferred TF relationships

Based on expression similarity (strong, medium, weak): TBX-37, TBX-38, CEH-39, CEH-41, T07F8.4, ELT-1, SEM-2


Based on ChIP-seq (directly from ModERN database, targets from L1 stage ChIP-seq data are underlined)

Targeting: ARID-1, AST-1, ATF-7, CEH-24, CEH-38, CEH-43, CEH-54, DAF-19, DMD-5, DVE-1, EGL-18, ELT-6, EOR-1, ETS-5, FKH-10, HBL-1, HLH-30, K09A11.1, LIM-7, MDL-1, NHR-102, NHR-35, NHR-49, NHR-6, NOB-1, PHA-4, POP-1, REF-1, SEL-8, SEM-4, SYD-9, TTX-1, UNC-130, UNC-62, Y75B8A.6, ZFH-2, ZTF-11, ZTF-6

Targeted by: DPL-1, EFL-1, RNT-1

Based on reannotated ChIP-seq (peaks are assigned to a target if it is located within 2 kb relative to the transcription start site; targets from L1 stage ChIP-seq data are underlined)

Targeting: AHA-1, ARID-1, ATF-7, CEH-24, CEH-43, CEH-54, DAF-19, DMD-5, DVE-1, EGL-18, ELT-6, EOR-1, ETS-5, HBL-1, MDL-1, NHR-49, NOB-1, PHA-4, POP-1, REF-1, SEM-4, TTX-1, UNC-62, Y48G1C.6, Y75B8A.6, ZFH-2, ZTF-11

Targeted by: DPL-1, EFL-1, RNT-1